I didn't mess with the sticks with the wires on them, either. I basically left all sticks in the case when I charged, but at the end I shuffled them around, figuring out a scheme where I could leave the sticks with the wires attached alone, while pairing the worst with the best...
If you look at the 3rd worksheet of that excel book I posted in your other thread, the top two or three rows show how I re-shuffled the sticks. The lower row is labeled 'original' and has the sticks numbered; the upper row shows where each stick ended up.
As I mentioned before, it's all a little messy, but you could probably figure it out. If you look down each column you'll see the various results, calculations, for each stick and you'll probably get some sense of why some sticks were moved. It's all kind of taken with a grain of salt though as my data collection and calculations are likely only good enough for something just a little better than leaving things alone, or making a guess in-the-dark... Not all the results pointed to clear-cut 'bad' and 'good' sticks. For example, my internal resistance calculations show a couple low values, but other things, like the charge and discharge pattern, show a stick that's fine, or among the better ones... I usually went with the charge/discharge pattern, that is, that was the most important factor deciding which sticks were weakest... Like sticks 12 and 13...
Here's a snip of that spreadsheet:
The row with "wire" or "w" shows which sticks have the wire attached.
The row with "t" shows which sticks have the voltage tap. Pretty sure this is right. But anyway, the colored cells show which sticks form pairs, that is, which sticks form a pair for which the BCM monitors voltage. The re-pairing, shuffling idea - I must have read it somewhere, or at least something similar - follows the logic that if 2 sticks are treated as one when it comes to being monitored for voltage, while voltage has some repercussions on what the BCM decides to do in terms of battery management or output, performance, etc., then pairing the weaker with the stronger will produce pairs that look more alike - in terms of voltage, at least... Seems to make some sense to me, but I have no idea whether it makes much if any difference...